NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.983	0.000	0.000	-0.051	0.000	0.000
Slide	0.000	2.417	1.312	0.000	-0.067	-0.164
Rise	0.000	1.313	7.728	0.000	-0.028	-0.164
Tilt	-0.051	0.000	0.000	0.030	0.000	0.000
Roll	0.000	-0.067	-0.028	0.000	0.020	0.008
Twist	0.000	-0.164	-0.164	0.000	0.008	0.029

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.361	0.000	0.000	-0.017	0.000	0.000
Slide	0.000	2.575	1.232	0.000	-0.057	-0.133
Rise	0.000	1.232	6.439	0.000	-0.040	-0.131
Tilt	-0.017	0.000	0.000	0.030	0.000	0.000
Roll	0.000	-0.057	-0.040	0.000	0.018	0.002
Twist	0.000	-0.133	-0.131	0.000	0.002	0.025

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.645	0.000	0.000	-0.053	0.000	0.000
Slide	0.000	2.406	1.350	0.000	-0.063	-0.148
Rise	0.000	1.350	6.511	0.000	-0.049	-0.169
Tilt	-0.053	0.000	0.000	0.031	0.000	0.000
Roll	0.000	-0.063	-0.049	0.000	0.022	0.008
Twist	0.000	-0.148	-0.169	0.000	0.008	0.034

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.428	0.000	0.000	-0.061	0.000	0.000
Slide	0.000	2.412	1.271	0.000	-0.055	-0.150
Rise	0.000	1.271	7.255	0.000	-0.057	-0.187
Tilt	-0.061	0.000	0.000	0.034	0.000	0.000
Roll	0.000	-0.055	-0.057	0.000	0.022	0.007
Twist	0.000	-0.150	-0.187	0.000	0.007	0.030

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.375	0.000	0.000	-0.073	0.000	0.000
Slide	0.000	2.715	1.121	0.000	-0.048	-0.182
Rise	0.000	1.121	8.187	0.000	-0.046	-0.165
Tilt	-0.073	0.000	0.000	0.028	0.000	0.000
Roll	0.000	-0.048	-0.046	0.000	0.021	0.006
Twist	0.000	-0.182	-0.165	0.000	0.006	0.039

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.874	0.000	0.000	-0.041	0.000	0.000
Slide	0.000	3.180	2.841	0.000	0.010	-0.063
Rise	0.000	2.841	10.025	0.000	0.056	-0.210
Tilt	-0.041	0.000	0.000	0.039	0.000	0.000
Roll	0.000	0.010	0.056	0.000	0.024	0.011
Twist	0.000	-0.063	-0.210	0.000	0.011	0.038

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.734	0.000	0.000	-0.051	0.000	0.000
Slide	0.000	2.500	1.100	0.000	0.003	-0.106
Rise	0.000	1.100	6.526	0.000	-0.095	-0.221
Tilt	-0.051	0.000	0.000	0.024	0.000	0.000
Roll	0.000	0.003	-0.095	0.000	0.017	0.009
Twist	0.000	-0.106	-0.221	0.000	0.009	0.024

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.948	0.000	0.000	-0.114	0.000	0.000
Slide	0.000	2.392	1.137	0.000	0.002	-0.112
Rise	0.000	1.137	6.302	0.000	-0.041	-0.209
Tilt	-0.114	0.000	0.000	0.028	0.000	0.000
Roll	0.000	0.002	-0.041	0.000	0.013	0.004
Twist	0.000	-0.112	-0.209	0.000	0.004	0.025

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.398	0.000	0.000	-0.119	0.000	0.000
Slide	0.000	2.810	2.890	0.000	0.050	-0.082
Rise	0.000	2.890	10.726	0.000	0.109	-0.212
Tilt	-0.119	0.000	0.000	0.040	0.000	0.000
Roll	0.000	0.050	0.109	0.000	0.025	0.006
Twist	0.000	-0.082	-0.212	0.000	0.006	0.039

[Image courtesy of Curves+]

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	Mean	Stdev
-aatt.4.cte	0.000	0.000

	Mean	Stdev
-aatt.5.cte	0.000	0.000

	Mean	Stdev
-aatt.6.cte	0.000	0.000

	Mean	Stdev
-aatt.7.cte	0.000	0.000

	Mean	Stdev
-aatt.8.cte	0.000	0.000

	Mean	Stdev
-acgt.9.cte	0.000	0.000

	Mean	Stdev
-catg.3.cte	0.000	0.000

	Mean	Stdev
-cgcg.10.cte	0.000	0.000

	Mean	Stdev
-gcgc.2.cte	0.000	0.000

	Mean	Stdev
rise-10-CGCG	3.243	0.361

	Mean	Stdev
roll-10-CGCG	5.380	6.885

	Mean	Stdev
shift-10-CGCG	0.000	1.093

	Mean	Stdev
slide-10-CGCG	0.129	0.563

	Mean	Stdev
tilt-10-CGCG	0.000	6.325

	Mean	Stdev
twist-10-CGCG	34.936	6.321

	Mean	Stdev
rise-2-GCGC	3.432	0.289

	Mean	Stdev
roll-2-GCGC	-0.580	5.194

	Mean	Stdev
shift-2-GCGC	0.000	0.750

	Mean	Stdev
slide-2-GCGC	-0.537	0.544

	Mean	Stdev
tilt-2-GCGC	0.000	4.436

	Mean	Stdev
twist-2-GCGC	35.265	4.304

	Mean	Stdev
rise-3-CATG	3.231	0.364

	Mean	Stdev
roll-3-CATG	9.045	6.965

	Mean	Stdev
shift-3-CATG	0.000	0.968

	Mean	Stdev
slide-3-CATG	-0.183	0.560

	Mean	Stdev
tilt-3-CATG	0.000	5.303

	Mean	Stdev
twist-3-CATG	30.368	7.236

	Mean	Stdev
rise-4-AATT	3.261	0.296

	Mean	Stdev
roll-4-AATT	1.892	5.805

	Mean	Stdev
shift-4-AATT	0.000	0.809

	Mean	Stdev
slide-4-AATT	-0.341	0.636

	Mean	Stdev
tilt-4-AATT	0.000	4.651

	Mean	Stdev
twist-4-AATT	33.019	5.951

	Mean	Stdev
rise-5-AATT	3.361	0.324

	Mean	Stdev
roll-5-AATT	0.701	5.963

	Mean	Stdev
shift-5-AATT	0.000	0.659

	Mean	Stdev
slide-5-AATT	-0.613	0.584

	Mean	Stdev
tilt-5-AATT	0.000	4.440

	Mean	Stdev
twist-5-AATT	33.087	5.813

	Mean	Stdev
rise-6-AATT	3.386	0.328

	Mean	Stdev
roll-6-AATT	1.416	5.454

	Mean	Stdev
shift-6-AATT	0.000	0.614

	Mean	Stdev
slide-6-AATT	-0.591	0.596

	Mean	Stdev
tilt-6-AATT	0.000	4.475

	Mean	Stdev
twist-6-AATT	35.168	5.102

	Mean	Stdev
rise-7-AATT	3.370	0.312

	Mean	Stdev
roll-7-AATT	1.377	5.410

	Mean	Stdev
shift-7-AATT	0.000	0.667

	Mean	Stdev
slide-7-AATT	-0.546	0.599

	Mean	Stdev
tilt-7-AATT	0.000	4.320

	Mean	Stdev
twist-7-AATT	34.084	5.569

	Mean	Stdev
rise-8-AATT	3.316	0.281

	Mean	Stdev
roll-8-AATT	0.570	5.380

	Mean	Stdev
shift-8-AATT	0.000	0.704

	Mean	Stdev
slide-8-AATT	-0.543	0.564

	Mean	Stdev
tilt-8-AATT	0.000	4.946

	Mean	Stdev
twist-8-AATT	35.637	4.770

	Mean	Stdev
rise-9-ACGT	3.350	0.302

	Mean	Stdev
roll-9-ACGT	-0.303	5.480

	Mean	Stdev
shift-9-ACGT	0.000	0.840

	Mean	Stdev
slide-9-ACGT	-0.672	0.497

	Mean	Stdev
tilt-9-ACGT	0.000	3.979

	Mean	Stdev
twist-9-ACGT	32.088	4.596

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